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  • Top cofit genes for DZA65_RS08045 from Dickeya dianthicola ME23

    CRISPR-associated protein Cas4
    SEED: CRISPR-associated RecB family exonuclease Cas4
    KEGG: putative RecB family exonuclease

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS00175 ABC transporter permease no 0.47
    2 DZA65_RS13280 L,D-transpeptidase family protein no 0.44
    3 DZA65_RS15060 hypothetical protein no 0.43
    4 DZA65_RS13125 Grx4 family monothiol glutaredoxin no 0.42
    5 DZA65_RS22630 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase no 0.42
    6 DZA65_RS22465 acyl-CoA synthetase no 0.42
    7 DZA65_RS21350 acetolactate synthase 2 catalytic subunit 0.27 0.40
    8 DZA65_RS22510 3-oxoacyl-ACP reductase FabG no 0.39
    9 DZA65_RS12555 hypothetical protein no 0.39
    10 DZA65_RS20360 large-conductance mechanosensitive channel protein MscL no 0.39
    11 DZA65_RS07030 6-phosphogluconolactonase no 0.38
    12 DZA65_RS17720 xanthine phosphoribosyltransferase no 0.38
    13 DZA65_RS11170 mannosyl-3-phosphoglycerate phosphatase-related protein no 0.37
    14 DZA65_RS20100 chlorinating enzyme no 0.36
    15 DZA65_RS16190 glutathione S-transferase family protein no 0.36
    16 DZA65_RS13390 quinone-dependent dihydroorotate dehydrogenase no 0.36
    17 DZA65_RS11085 L-arabinose ABC transporter permease AraH no 0.36
    18 DZA65_RS12180 hypothetical protein no 0.36
    19 DZA65_RS09140 DeoR/GlpR transcriptional regulator no 0.36
    20 DZA65_RS06150 adenine phosphoribosyltransferase no 0.36

    Or look for negative cofitness