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  • Top cofit genes for DZA65_RS07935 from Dickeya dianthicola ME23

    LysE family translocator

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS00545 helix-turn-helix transcriptional regulator no 0.47
    2 DZA65_RS16185 two-component system response regulator BaeR no 0.45
    3 DZA65_RS05880 magnesium-translocating P-type ATPase no 0.45
    4 DZA65_RS06385 transporter substrate-binding domain-containing protein no 0.44
    5 DZA65_RS11870 high frequency lysogenization protein HflD no 0.44
    6 DZA65_RS19680 RNA chaperone Hfq no 0.42
    7 DZA65_RS08240 efflux RND transporter periplasmic adaptor subunit no 0.42
    8 DZA65_RS07020 molybdenum ABC transporter ATP-binding protein ModC no 0.41
    9 DZA65_RS00660 ABC transporter permease no 0.41
    10 DZA65_RS08555 type VI secretion system baseplate subunit TssF no 0.41
    11 DZA65_RS06245 2Fe-2S ferredoxin-like protein no 0.40
    12 DZA65_RS16370 hypothetical protein no 0.39
    13 DZA65_RS08105 AcsA protein no 0.39
    14 DZA65_RS10400 type VI secretion system tip protein VgrG no 0.39
    15 DZA65_RS16755 ABC transporter substrate-binding protein no 0.39
    16 DZA65_RS21610 envelope stress response regulator transcription factor CpxR 0.46 0.39
    17 DZA65_RS08235 TetR/AcrR family transcriptional regulator no 0.38
    18 DZA65_RS21515 ribonuclease E activity regulator RraA no 0.38
    19 DZA65_RS07535 DEAD/DEAH box helicase no 0.38
    20 DZA65_RS09790 spermidine/putrescine ABC transporter substrate-binding protein PotF no 0.38

    Or look for negative cofitness