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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS07935 from
Dickeya dianthicola ME23
LysE family translocator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS00545
helix-turn-helix transcriptional regulator
no
0.47
2
DZA65
_RS16185
two-component system response regulator BaeR
no
0.45
3
DZA65
_RS05880
magnesium-translocating P-type ATPase
no
0.45
4
DZA65
_RS06385
transporter substrate-binding domain-containing protein
no
0.44
5
DZA65
_RS11870
high frequency lysogenization protein HflD
no
0.44
6
DZA65
_RS19680
RNA chaperone Hfq
no
0.42
7
DZA65
_RS08240
efflux RND transporter periplasmic adaptor subunit
no
0.42
8
DZA65
_RS07020
molybdenum ABC transporter ATP-binding protein ModC
no
0.41
9
DZA65
_RS00660
ABC transporter permease
no
0.41
10
DZA65
_RS08555
type VI secretion system baseplate subunit TssF
no
0.41
11
DZA65
_RS06245
2Fe-2S ferredoxin-like protein
no
0.40
12
DZA65
_RS16370
hypothetical protein
no
0.39
13
DZA65
_RS08105
AcsA protein
no
0.39
14
DZA65
_RS10400
type VI secretion system tip protein VgrG
no
0.39
15
DZA65
_RS16755
ABC transporter substrate-binding protein
no
0.39
16
DZA65
_RS21610
envelope stress response regulator transcription factor CpxR
0.46
0.39
17
DZA65
_RS08235
TetR/AcrR family transcriptional regulator
no
0.38
18
DZA65
_RS21515
ribonuclease E activity regulator RraA
no
0.38
19
DZA65
_RS07535
DEAD/DEAH box helicase
no
0.38
20
DZA65
_RS09790
spermidine/putrescine ABC transporter substrate-binding protein PotF
no
0.38
Or look for
negative cofitness