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  • Top cofit genes for DZA65_RS07830 from Dickeya dianthicola ME23

    hydrogenase large subunit
    SEED: Formate hydrogenlyase subunit 5
    KEGG: hydrogenase-4 component G

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS06725 methyl-accepting chemotaxis protein no 0.48
    2 DZA65_RS16040 ABC transporter permease subunit no 0.47
    3 DZA65_RS12715 ABC transporter substrate-binding protein no 0.46
    4 DZA65_RS14830 formate dehydrogenase-N subunit alpha 0.69 0.45
    5 DZA65_RS18245 inorganic triphosphatase no 0.44
    6 DZA65_RS01615 stringent starvation protein A no 0.44
    7 DZA65_RS06980 galactokinase no 0.44
    8 DZA65_RS22360 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG no 0.44
    9 DZA65_RS15280 acetate kinase 0.35 0.43
    10 DZA65_RS10810 formyltetrahydrofolate deformylase no 0.43
    11 DZA65_RS22695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.43 0.43
    12 DZA65_RS02495 YtjB family periplasmic protein no 0.43
    13 DZA65_RS09910 thioredoxin-disulfide reductase no 0.42
    14 DZA65_RS01260 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase no 0.42
    15 DZA65_RS19475 threonine synthase 0.56 0.42
    16 DZA65_RS01435 AsmA2 domain-containing protein 0.30 0.41
    17 DZA65_RS19175 catabolite repressor/activator 0.66 0.41
    18 DZA65_RS12995 exoribonuclease II no 0.41
    19 DZA65_RS09200 glutamine ABC transporter substrate-binding protein GlnH 0.38 0.41
    20 DZA65_RS07110 dTDP-glucose 4,6-dehydratase no 0.41

    Or look for negative cofitness