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  • Top cofit genes for DZA65_RS07705 from Dickeya dianthicola ME23

    type IV secretion protein Rhs

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04320 MacB family efflux pump subunit no 0.52
    2 DZA65_RS20310 DUF1488 domain-containing protein no 0.46
    3 DZA65_RS19655 adenylosuccinate synthase no 0.45
    4 DZA65_RS16730 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ no 0.45
    5 DZA65_RS01990 ribonuclease E inhibitor RraB no 0.44
    6 DZA65_RS03705 hypothetical protein no 0.43
    7 DZA65_RS03955 hypothetical protein no 0.41
    8 DZA65_RS09620 dihydrolipoamide succinyltransferase no 0.41
    9 DZA65_RS12655 phage major tail tube protein no 0.41
    10 DZA65_RS20785 PilN domain-containing protein no 0.41
    11 DZA65_RS02900 pirin family protein no 0.40
    12 DZA65_RS20355 Trk system potassium transporter TrkA no 0.40
    13 DZA65_RS17770 acireductone dioxygenase no 0.40
    14 DZA65_RS02710 outer membrane beta-barrel protein no 0.39
    15 DZA65_RS20725 peptidylprolyl isomerase A no 0.39
    16 DZA65_RS08265 ABC transporter permease no 0.39
    17 DZA65_RS04180 tail fiber assembly protein no 0.39
    18 DZA65_RS13120 ribonuclease T no 0.39
    19 DZA65_RS00635 hypothetical protein no 0.39
    20 DZA65_RS08320 ABC transporter substrate-binding protein no 0.38

    Or look for negative cofitness