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Cofit
Top cofit genes for DZA65_RS07705 from
Dickeya dianthicola ME23
type IV secretion protein Rhs
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS04320
MacB family efflux pump subunit
no
0.52
2
DZA65
_RS20310
DUF1488 domain-containing protein
no
0.46
3
DZA65
_RS19655
adenylosuccinate synthase
no
0.45
4
DZA65
_RS16730
tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ
no
0.45
5
DZA65
_RS01990
ribonuclease E inhibitor RraB
no
0.44
6
DZA65
_RS03705
hypothetical protein
no
0.43
7
DZA65
_RS03955
hypothetical protein
no
0.41
8
DZA65
_RS09620
dihydrolipoamide succinyltransferase
no
0.41
9
DZA65
_RS12655
phage major tail tube protein
no
0.41
10
DZA65
_RS20785
PilN domain-containing protein
no
0.41
11
DZA65
_RS02900
pirin family protein
no
0.40
12
DZA65
_RS20355
Trk system potassium transporter TrkA
no
0.40
13
DZA65
_RS17770
acireductone dioxygenase
no
0.40
14
DZA65
_RS02710
outer membrane beta-barrel protein
no
0.39
15
DZA65
_RS20725
peptidylprolyl isomerase A
no
0.39
16
DZA65
_RS08265
ABC transporter permease
no
0.39
17
DZA65
_RS04180
tail fiber assembly protein
no
0.39
18
DZA65
_RS13120
ribonuclease T
no
0.39
19
DZA65
_RS00635
hypothetical protein
no
0.39
20
DZA65
_RS08320
ABC transporter substrate-binding protein
no
0.38
Or look for
negative cofitness