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  • Top cofit genes for DZA65_RS07685 from Dickeya dianthicola ME23

    helix-turn-helix transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS17900 transcriptional repressor MprA no 0.45
    2 DZA65_RS03145 putative DNA-binding transcriptional regulator no 0.40
    3 DZA65_RS22980 hypothetical protein no 0.40
    4 DZA65_RS18635 cytochrome P450 no 0.40
    5 DZA65_RS13165 winged helix-turn-helix transcriptional regulator no 0.40
    6 DZA65_RS22315 D-ribose pyranase no 0.39
    7 DZA65_RS08545 type VI secretion system contractile sheath large subunit no 0.39
    8 DZA65_RS21730 high-affinity branched-chain amino acid ABC transporter permease LivM 0.39 0.38
    9 DZA65_RS13320 hotdog fold thioesterase no 0.38
    10 DZA65_RS14685 SDR family oxidoreductase no 0.38
    11 DZA65_RS12245 type III secretion system export apparatus subunit SctS no 0.37
    12 DZA65_RS05950 aldo/keto reductase no 0.37
    13 DZA65_RS14125 pectate lyase no 0.37
    14 DZA65_RS13565 LacI family transcriptional regulator no 0.36
    15 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB no 0.36
    16 DZA65_RS18140 nucleoside triphosphate pyrophosphohydrolase no 0.36
    17 DZA65_RS04090 phage major capsid protein, P2 family no 0.36
    18 DZA65_RS12780 L-lactate permease no 0.36
    19 DZA65_RS13105 transcriptional regulator SlyA no 0.35
    20 DZA65_RS16250 amino acid ABC transporter ATP-binding protein 0.41 0.35

    Or look for negative cofitness