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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS07685 from
Dickeya dianthicola ME23
helix-turn-helix transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS17900
transcriptional repressor MprA
no
0.45
2
DZA65
_RS03145
putative DNA-binding transcriptional regulator
no
0.40
3
DZA65
_RS22980
hypothetical protein
no
0.40
4
DZA65
_RS18635
cytochrome P450
no
0.40
5
DZA65
_RS13165
winged helix-turn-helix transcriptional regulator
no
0.40
6
DZA65
_RS22315
D-ribose pyranase
no
0.39
7
DZA65
_RS08545
type VI secretion system contractile sheath large subunit
no
0.39
8
DZA65
_RS21730
high-affinity branched-chain amino acid ABC transporter permease LivM
0.39
0.38
9
DZA65
_RS13320
hotdog fold thioesterase
no
0.38
10
DZA65
_RS14685
SDR family oxidoreductase
no
0.38
11
DZA65
_RS12245
type III secretion system export apparatus subunit SctS
no
0.37
12
DZA65
_RS05950
aldo/keto reductase
no
0.37
13
DZA65
_RS14125
pectate lyase
no
0.37
14
DZA65
_RS13565
LacI family transcriptional regulator
no
0.36
15
DZA65
_RS20350
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
no
0.36
16
DZA65
_RS18140
nucleoside triphosphate pyrophosphohydrolase
no
0.36
17
DZA65
_RS04090
phage major capsid protein, P2 family
no
0.36
18
DZA65
_RS12780
L-lactate permease
no
0.36
19
DZA65
_RS13105
transcriptional regulator SlyA
no
0.35
20
DZA65
_RS16250
amino acid ABC transporter ATP-binding protein
0.41
0.35
Or look for
negative cofitness