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  • Top cofit genes for DZA65_RS07615 from Dickeya dianthicola ME23

    type IV secretion system protein
    SEED: Integral inner membrane protein of type IV secretion complex (VirB6)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS07270 D-galactonate utilization transcriptional regulator DgoR no 0.44
    2 DZA65_RS02520 metal-dependent hydrolase no 0.44
    3 DZA65_RS07525 IS481 family transposase no 0.42
    4 DZA65_RS05645 DUF692 family protein no 0.41
    5 DZA65_RS16075 isochorismatase family protein no 0.39
    6 DZA65_RS18315 DUF1107 domain-containing protein no 0.38
    7 DZA65_RS00885 uridine phosphorylase no 0.38
    8 DZA65_RS03535 RNA polymerase subunit sigma-24 no 0.37
    9 DZA65_RS19790 biotin attachment protein no 0.37
    10 DZA65_RS19165 division/cell wall cluster transcriptional repressor MraZ no 0.37
    11 DZA65_RS08710 ABC transporter ATP-binding protein no 0.37
    12 DZA65_RS18925 four-carbon acid sugar kinase family protein no 0.36
    13 DZA65_RS22665 helix-turn-helix domain-containing protein no 0.36
    14 DZA65_RS00045 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ no 0.36
    15 DZA65_RS05040 TIGR03751 family conjugal transfer lipoprotein no 0.36
    16 DZA65_RS10015 amidohydrolase no 0.35
    17 DZA65_RS00135 GNAT family N-acetyltransferase no 0.35
    18 DZA65_RS22250 YihD family protein no 0.35
    19 DZA65_RS00620 FkbM family methyltransferase no 0.34
    20 DZA65_RS01295 amino acid ABC transporter permease no 0.34

    Or look for negative cofitness