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Cofit
Top cofit genes for DZA65_RS07455 from
Dickeya dianthicola ME23
IS3 family transposase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS21040
threonine export protein RhtC
no
0.58
2
DZA65
_RS14475
DUF1738 domain-containing protein
no
0.58
3
DZA65
_RS10635
HDOD domain-containing protein
no
0.58
4
DZA65
_RS00580
LysR family transcriptional regulator
no
0.57
5
DZA65
_RS03140
putative DNA-binding transcriptional regulator
no
0.56
6
DZA65
_RS09740
alpha/beta hydrolase
no
0.52
7
DZA65
_RS04300
LuxR family transcriptional regulator
no
0.52
8
DZA65
_RS13545
arylamine N-acetyltransferase
no
0.51
9
DZA65
_RS07375
LysE family translocator
no
0.51
10
DZA65
_RS20185
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
no
0.51
11
DZA65
_RS16960
tRNA-Ala
no
0.51
12
DZA65
_RS21690
chemotaxis protein
no
0.50
13
DZA65
_RS02700
L-talarate/galactarate dehydratase
no
0.50
14
DZA65
_RS03255
polyribonucleotide nucleotidyltransferase
no
0.49
15
DZA65
_RS09775
oxygen-insensitive NADPH nitroreductase
no
0.49
16
DZA65
_RS14595
cupin
no
0.49
17
DZA65
_RS05575
DUF4102 domain-containing protein
no
0.49
18
DZA65
_RS15850
histidine utilization repressor
no
0.49
19
DZA65
_RS21590
DNA mismatch repair protein MutT
no
0.49
20
DZA65
_RS12950
phage shock protein operon transcriptional activator
no
0.48
Or look for
negative cofitness