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  • Top cofit genes for DZA65_RS06970 from Dickeya dianthicola ME23

    efflux RND transporter permease subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS11600 ribonuclease D no 0.47
    2 DZA65_RS22035 ABC transporter ATP-binding protein no 0.44
    3 DZA65_RS16670 nucleoside-diphosphate kinase no 0.44
    4 DZA65_RS08465 metal ABC transporter permease no 0.44
    5 DZA65_RS16465 terminase no 0.43
    6 DZA65_RS19655 adenylosuccinate synthase no 0.42
    7 DZA65_RS15180 regulatory protein GemA no 0.42
    8 DZA65_RS04600 conjugal transfer protein TraF no 0.41
    9 DZA65_RS13800 RpiB/LacA/LacB family sugar-phosphate isomerase no 0.41
    10 DZA65_RS04490 ribonuclease Z no 0.41
    11 DZA65_RS18575 ABC transporter permease subunit no 0.41
    12 DZA65_RS15715 mechanosensitive ion channel family protein no 0.40
    13 DZA65_RS01905 ABC transporter ATP-binding protein no 0.40
    14 DZA65_RS13770 HAMP domain-containing protein no 0.39
    15 DZA65_RS08565 type VI secretion system-associated FHA domain protein TagH no 0.39
    16 DZA65_RS06465 outer membrane protein assembly factor BamC no 0.39
    17 DZA65_RS15670 type II secretion system inner membrane protein GspF no 0.39
    18 DZA65_RS06625 CNNM family magnesium/cobalt transport protein CorC no 0.38
    19 DZA65_RS00260 DUF3053 domain-containing protein no 0.38
    20 DZA65_RS03805 GNAT family N-acetyltransferase no 0.38

    Or look for negative cofitness