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  • Top cofit genes for DZA65_RS06960 from Dickeya dianthicola ME23

    3-deoxy-7-phosphoheptulonate synthase AroG
    SEED: 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54)
    KEGG: 3-deoxy-7-phosphoheptulonate synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS17510 phosphatidylserine decarboxylase family protein no 0.52
    2 DZA65_RS04430 multidrug/biocide efflux PACE transporter no 0.50
    3 DZA65_RS14380 TrbC/VirB2 family protein no 0.50
    4 DZA65_RS05740 M20/M25/M40 family metallo-hydrolase no 0.49
    5 DZA65_RS03580 tyrosine-type recombinase/integrase no 0.47
    6 DZA65_RS05430 flavodoxin no 0.46
    7 DZA65_RS12450 respiratory nitrate reductase subunit gamma 0.33 0.46
    8 DZA65_RS02515 stress response protein no 0.45
    9 DZA65_RS04195 hypothetical protein no 0.45
    10 DZA65_RS20125 LysR family transcriptional regulator no 0.45
    11 DZA65_RS22600 4Fe-4S dicluster domain-containing protein no 0.45
    12 DZA65_RS08930 molybdopterin molybdotransferase MoeA 0.49 0.45
    13 DZA65_RS00675 isoaspartyl peptidase/L-asparaginase 0.24 0.44
    14 DZA65_RS08365 CDP-diacylglycerol diphosphatase no 0.44
    15 DZA65_RS08165 hydrolase no 0.44
    16 DZA65_RS09000 GTP 3',8-cyclase MoaA no 0.43
    17 DZA65_RS03445 aminomethyl-transferring glycine dehydrogenase no 0.43
    18 DZA65_RS00370 pseudouridine-5'-phosphate glycosidase no 0.43
    19 DZA65_RS14600 porphobilinogen synthase no 0.43
    20 DZA65_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD no 0.42

    Or look for negative cofitness