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  • Top cofit genes for DZA65_RS06565 from Dickeya dianthicola ME23

    23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
    SEED: LSU m3Psi1915 methyltransferase RlmH
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS08220 hypothetical protein no 0.52
    2 DZA65_RS09660 LysR family transcriptional regulator 0.49 0.49
    3 DZA65_RS00740 nucleoid occlusion factor SlmA 0.83 0.48
    4 DZA65_RS11930 type I toxin-antitoxin system SymE family toxin no 0.48
    5 DZA65_RS04905 type IV pilus biogenesis protein PilM no 0.47
    6 DZA65_RS17800 alanine--glyoxylate aminotransferase family protein no 0.46
    7 DZA65_RS01405 RNase E specificity factor CsrD 0.68 0.45
    8 DZA65_RS16255 amino acid ABC transporter permease no 0.44
    9 DZA65_RS09975 formate C-acetyltransferase no 0.44
    10 DZA65_RS17730 beta-Ala-His dipeptidase 0.37 0.44
    11 DZA65_RS18930 iron-containing alcohol dehydrogenase 0.55 0.43
    12 DZA65_RS18250 SH3 domain-containing protein 0.51 0.42
    13 DZA65_RS01585 serine endoprotease DegQ no 0.42
    14 DZA65_RS04050 DNA cytosine methyltransferase no 0.42
    15 DZA65_RS18580 alkaline phosphatase family protein 0.26 0.42
    16 DZA65_RS00770 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.31 0.42
    17 DZA65_RS19055 GMP reductase no 0.42
    18 DZA65_RS18525 PTS sugar transporter subunit IIB no 0.41
    19 DZA65_RS17575 ABC transporter permease no 0.41
    20 DZA65_RS04400 SAM-dependent methyltransferase TehB no 0.41

    Or look for negative cofitness