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  • Top cofit genes for DZA65_RS06525 from Dickeya dianthicola ME23

    twin-arginine translocase subunit TatE
    SEED: Twin-arginine translocation protein TatE
    KEGG: sec-independent protein translocase protein TatE

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04665 TetR/AcrR family transcriptional regulator no 0.49
    2 DZA65_RS14830 formate dehydrogenase-N subunit alpha no 0.49
    3 DZA65_RS12645 tail assembly protein no 0.47
    4 DZA65_RS03650 phosphodiesterase no 0.45
    5 DZA65_RS18355 DUF488 family protein no 0.44
    6 DZA65_RS10155 exodeoxyribonuclease I no 0.43
    7 DZA65_RS16730 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ no 0.41
    8 DZA65_RS16690 Fe-S cluster assembly protein IscX no 0.40
    9 DZA65_RS02925 membrane protein no 0.40
    10 DZA65_RS04625 IS4 family transposase no 0.40
    11 DZA65_RS15210 hypothetical protein no 0.39
    12 DZA65_RS10970 PHP domain-containing protein no 0.39
    13 DZA65_RS02060 leucyl aminopeptidase 0.15 0.39
    14 DZA65_RS03825 DinI family protein no 0.38
    15 DZA65_RS07875 glutamate/aspartate:proton symporter GltP no 0.37
    16 DZA65_RS21620 hypothetical protein no 0.37
    17 DZA65_RS09850 N-acetylmuramoyl-L-alanine amidase no 0.37
    18 DZA65_RS20865 pimeloyl-ACP methyl ester esterase BioH no 0.37
    19 DZA65_RS10740 aldo/keto reductase no 0.37
    20 DZA65_RS07705 type IV secretion protein Rhs no 0.37

    Or look for negative cofitness