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  • Top cofit genes for DZA65_RS06445 from Dickeya dianthicola ME23

    M48 family metallopeptidase
    SEED: Exported zinc metalloprotease YfgC precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS07125 dTDP-4-dehydrorhamnose reductase 0.53 0.71
    2 DZA65_RS12505 carboxy terminal-processing peptidase 0.52 0.65
    3 DZA65_RS04230 outer membrane protein assembly factor BamE 0.73 0.63
    4 DZA65_RS03260 lipoprotein NlpI 0.46 0.61
    5 DZA65_RS13750 glucans biosynthesis glucosyltransferase MdoH 0.63 0.60
    6 DZA65_RS17990 methionine ABC transporter ATP-binding protein MetN no 0.59
    7 DZA65_RS11120 mannose-6-phosphate isomerase 0.43 0.59
    8 DZA65_RS06895 Tol-Pal system protein TolQ 0.33 0.58
    9 DZA65_RS15765 galactosidase no 0.58
    10 DZA65_RS10485 membrane protein 0.45 0.57
    11 DZA65_RS00795 glycosyltransferase family 9 protein no 0.57
    12 DZA65_RS04260 GDP-mannose pyrophosphatase NudK no 0.57
    13 DZA65_RS03670 kdo(2)-lipid IV(A) palmitoleoyltransferase no 0.56
    14 DZA65_RS15760 beta-galactosidase no 0.55
    15 DZA65_RS15785 ABC transporter ATP-binding protein no 0.55
    16 DZA65_RS00995 transcription/translation regulatory transformer protein RfaH 0.31 0.55
    17 DZA65_RS17995 methionine ABC transporter permease MetI no 0.55
    18 DZA65_RS02490 phosphoserine phosphatase 0.28 0.55
    19 DZA65_RS07120 dTDP-4-dehydrorhamnose 3,5-epimerase 0.52 0.54
    20 DZA65_RS00365 DMT family transporter no 0.54

    Or look for negative cofitness