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  • Top cofit genes for DZA65_RS06290 from Dickeya dianthicola ME23

    isochorismate synthase MenF
    SEED: Menaquinone-specific isochorismate synthase (EC 5.4.4.2)
    KEGG: menaquinone-specific isochorismate synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS15180 regulatory protein GemA no 0.48
    2 DZA65_RS07875 glutamate/aspartate:proton symporter GltP no 0.42
    3 DZA65_RS02060 leucyl aminopeptidase 0.28 0.41
    4 DZA65_RS16730 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ 0.67 0.40
    5 DZA65_RS07495 alanine--glyoxylate aminotransferase family protein no 0.39
    6 DZA65_RS03385 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC 0.45 0.39
    7 DZA65_RS21225 lipid III flippase WzxE no 0.39
    8 DZA65_RS04625 IS4 family transposase no 0.38
    9 DZA65_RS03065 SDR family oxidoreductase no 0.38
    10 DZA65_RS07295 oxidoreductase no 0.38
    11 DZA65_RS13000 aldo/keto reductase no 0.38
    12 DZA65_RS12850 tRNA 2-thiocytidine(32) synthetase TtcA no 0.37
    13 DZA65_RS10380 phage tail sheath family protein no 0.37
    14 DZA65_RS17910 multidrug efflux MFS transporter permease subunit EmrB no 0.37
    15 DZA65_RS04410 anaerobic nitric oxide reductase flavorubredoxin 0.38 0.36
    16 DZA65_RS12100 ShlB/FhaC/HecB family hemolysin secretion/activation protein 0.33 0.36
    17 DZA65_RS02310 delta-endotoxin CytB no 0.36
    18 DZA65_RS21875 UDP-forming cellulose synthase catalytic subunit no 0.36
    19 DZA65_RS04235 DNA repair protein RecN no 0.36
    20 DZA65_RS14115 cytochrome b562 0.39 0.36

    Or look for negative cofitness