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  • Top cofit genes for DZA65_RS06210 from Dickeya dianthicola ME23

    glycoside hydrolase family 28 protein
    SEED: Polygalacturonase (EC 3.2.1.15)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS17720 xanthine phosphoribosyltransferase no 0.52
    2 DZA65_RS07415 glutaredoxin-dependent arsenate reductase no 0.50
    3 DZA65_RS03410 tRNA-Leu no 0.48
    4 DZA65_RS10520 HoxN/HupN/NixA family nickel/cobalt transporter 0.26 0.47
    5 DZA65_RS07895 ABC transporter ATP-binding protein no 0.45
    6 DZA65_RS12505 carboxy terminal-processing peptidase no 0.45
    7 DZA65_RS21205 amino acid permease no 0.45
    8 DZA65_RS16285 type II secretion system major pseudopilin GspG no 0.44
    9 DZA65_RS02895 zinc uptake transcriptional repressor Zur no 0.43
    10 DZA65_RS21575 6-phosphofructokinase no 0.43
    11 DZA65_RS22190 glucose-1-phosphatase no 0.42
    12 DZA65_RS03260 lipoprotein NlpI no 0.42
    13 DZA65_RS19870 amino acid ABC transporter ATP-binding protein no 0.42
    14 DZA65_RS21425 TonB-dependent vitamin B12 receptor BtuB 0.51 0.41
    15 DZA65_RS11140 LysR family transcriptional regulator no 0.41
    16 DZA65_RS13205 HNH nuclease family protein no 0.41
    17 DZA65_RS06550 endolytic peptidoglycan transglycosylase RlpA no 0.41
    18 DZA65_RS10890 cardiolipin synthase no 0.40
    19 DZA65_RS01425 septum formation inhibitor Maf no 0.40
    20 DZA65_RS08830 type VI secretion system tip protein VgrG no 0.40

    Or look for negative cofitness