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  • Top cofit genes for DZA65_RS06005 from Dickeya dianthicola ME23

    trigger factor
    SEED: Cell division trigger factor (EC 5.2.1.8)
    KEGG: trigger factor

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS21610 envelope stress response regulator transcription factor CpxR 0.69 0.67
    2 DZA65_RS08990 excinuclease ABC subunit B 0.84 0.62
    3 DZA65_RS20755 SPOR domain-containing protein 0.66 0.62
    4 DZA65_RS01355 tRNA dihydrouridine synthase DusB 0.84 0.59
    5 DZA65_RS08485 TetR/AcrR family transcriptional regulator no 0.58
    6 DZA65_RS10270 ribonuclease T2 no 0.58
    7 DZA65_RS01525 LPS export ABC transporter periplasmic protein LptC 0.40 0.58
    8 DZA65_RS18030 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.81 0.58
    9 DZA65_RS14010 flagellar basal body rod protein FlgB 0.51 0.57
    10 DZA65_RS01680 penicillin-binding protein activator 0.87 0.57
    11 DZA65_RS16640 YfgM family protein 0.40 0.57
    12 DZA65_RS13985 flagellar basal-body rod protein FlgG 0.74 0.57
    13 DZA65_RS13975 flagellar basal body P-ring protein FlgI 0.64 0.57
    14 DZA65_RS14005 flagellar basal body rod protein FlgC 0.57 0.56
    15 DZA65_RS13990 flagellar basal body rod protein FlgF 0.62 0.56
    16 DZA65_RS13790 Lon protease family protein 0.62 0.56
    17 DZA65_RS14780 multidrug efflux RND transporter permease subunit no 0.56
    18 DZA65_RS13995 flagellar hook protein FlgE 0.77 0.55
    19 DZA65_RS08075 TonB-dependent receptor no 0.55
    20 DZA65_RS00980 Sec-independent protein translocase subunit TatC 0.91 0.55

    Or look for negative cofitness