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  • Top cofit genes for DZA65_RS05945 from Dickeya dianthicola ME23

    YajQ family cyclic di-GMP-binding protein
    SEED: FIG001943: hypothetical protein YajQ
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS19955 nitrogen fixation protein NifW no 0.53
    2 DZA65_RS11970 hypothetical protein no 0.51
    3 DZA65_RS09125 D-alanyl-D-alanine endopeptidase 0.36 0.50
    4 DZA65_RS11375 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha 0.38 0.48
    5 DZA65_RS00380 amino acid adenylation domain-containing protein 0.41 0.47
    6 DZA65_RS20180 fumarate reductase (quinol) flavoprotein subunit 0.32 0.46
    7 DZA65_RS00205 DNA-3-methyladenine glycosylase I no 0.46
    8 DZA65_RS01950 indoleacetamide hydrolase no 0.46
    9 DZA65_RS16770 3-phenylpropionate MFS transporter no 0.45
    10 DZA65_RS21495 cell division protein FtsN no 0.45
    11 DZA65_RS16365 hypothetical protein 0.36 0.45
    12 DZA65_RS00865 DMT family transporter 0.55 0.44
    13 DZA65_RS03765 DHA2 family efflux MFS transporter permease subunit no 0.44
    14 DZA65_RS21875 UDP-forming cellulose synthase catalytic subunit 0.18 0.43
    15 DZA65_RS14775 TolC family protein no 0.43
    16 DZA65_RS05035 TIGR03752 family integrating conjugative element protein no 0.43
    17 DZA65_RS15345 cell division protein DedD no 0.43
    18 DZA65_RS20065 HlyD family efflux transporter periplasmic adaptor subunit no 0.43
    19 DZA65_RS07345 NAD(P)H-dependent oxidoreductase no 0.42
    20 DZA65_RS08010 hypothetical protein no 0.42

    Or look for negative cofitness