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  • Top cofit genes for DZA65_RS05805 from Dickeya dianthicola ME23

    exonuclease subunit SbcD
    SEED: Exonuclease SbcD
    KEGG: exonuclease SbcD

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS16460 hypothetical protein no 0.44
    2 DZA65_RS16570 recombinase RecT no 0.42
    3 DZA65_RS05425 tRNA pseudouridine(65) synthase TruC no 0.42
    4 DZA65_RS17790 amidohydrolase no 0.41
    5 DZA65_RS16835 membrane-bound lytic murein transglycosylase MltF 0.33 0.41
    6 DZA65_RS02945 transcriptional regulator ExuR no 0.39
    7 DZA65_RS07010 molybdate ABC transporter substrate-binding protein no 0.39
    8 DZA65_RS02020 HAMP domain-containing protein no 0.39
    9 DZA65_RS17280 endonuclease/exonuclease/phosphatase family protein no 0.38
    10 DZA65_RS04515 multidrug efflux MFS transporter 0.52 0.38
    11 DZA65_RS10550 murein DD-endopeptidase MepM 0.47 0.38
    12 DZA65_RS08635 iron uptake system protein EfeO no 0.38
    13 DZA65_RS05010 TIGR03758 family integrating conjugative element protein no 0.38
    14 DZA65_RS20195 fumarate reductase subunit FrdD no 0.38
    15 DZA65_RS07020 molybdenum ABC transporter ATP-binding protein ModC 0.34 0.38
    16 DZA65_RS06125 multidrug efflux transporter transcriptional repressor AcrR no 0.38
    17 DZA65_RS09640 oxidoreductase no 0.38
    18 DZA65_RS02245 transketolase 0.33 0.37
    19 DZA65_RS02375 HD domain-containing protein no 0.37
    20 DZA65_RS21435 YijD family membrane protein no 0.37

    Or look for negative cofitness