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  • Top cofit genes for DZA65_RS05195 from Dickeya dianthicola ME23

    conjugal transfer protein TraF
    SEED: IncI1 plasmid conjugative transfer protein TraF

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD no 0.59
    2 DZA65_RS21505 HslU--HslV peptidase ATPase subunit 0.42 0.54
    3 DZA65_RS11315 ABC transporter ATP-binding protein no 0.54
    4 DZA65_RS16665 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN no 0.53
    5 DZA65_RS12485 nitrate/nitrite two-component system sensor histidine kinase NarX no 0.53
    6 DZA65_RS05655 hypothetical protein no 0.51
    7 DZA65_RS12220 type III secretion system ATPase SctN no 0.49
    8 DZA65_RS14770 ANTAR domain-containing protein no 0.49
    9 DZA65_RS15315 ABC transporter permease no 0.49
    10 DZA65_RS09145 aspartate aminotransferase family protein no 0.49
    11 DZA65_RS15505 long-chain fatty acid transporter FadL no 0.48
    12 DZA65_RS20555 sulfurtransferase complex subunit TusD no 0.48
    13 DZA65_RS01465 DUF1543 domain-containing protein no 0.48
    14 DZA65_RS20090 DMT family transporter no 0.48
    15 DZA65_RS09010 cyclic pyranopterin monophosphate synthase MoaC no 0.47
    16 DZA65_RS05165 hypothetical protein no 0.47
    17 DZA65_RS12445 NUDIX domain-containing protein no 0.47
    18 DZA65_RS12635 recombinase family protein no 0.47
    19 DZA65_RS17455 nicotinamide-nucleotide amidase no 0.47
    20 DZA65_RS08105 AcsA protein no 0.47

    Or look for negative cofitness