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  • Top cofit genes for DZA65_RS05065 from Dickeya dianthicola ME23

    TIGR03757 family integrating conjugative element protein
    SEED: corresponds to STY4575 from Accession AL513382: Salmonella typhi CT18

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS03635 sugar transferase no 0.56
    2 DZA65_RS06895 Tol-Pal system protein TolQ no 0.56
    3 DZA65_RS06030 peptidylprolyl isomerase no 0.55
    4 DZA65_RS18650 alanine racemase no 0.55
    5 DZA65_RS13755 glucan biosynthesis protein G no 0.55
    6 DZA65_RS11360 fumarate/nitrate reduction transcriptional regulator Fnr no 0.54
    7 DZA65_RS09975 formate C-acetyltransferase no 0.54
    8 DZA65_RS13750 glucans biosynthesis glucosyltransferase MdoH no 0.53
    9 DZA65_RS10585 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase no 0.53
    10 DZA65_RS21510 1,4-dihydroxy-2-naphthoate polyprenyltransferase no 0.52
    11 DZA65_RS21270 ATP-dependent RNA helicase RhlB no 0.52
    12 DZA65_RS09970 pyruvate formate lyase 1-activating protein no 0.52
    13 DZA65_RS06990 UDP-glucose 4-epimerase GalE no 0.51
    14 DZA65_RS04230 outer membrane protein assembly factor BamE no 0.51
    15 DZA65_RS19745 GDP-L-fucose synthase no 0.51
    16 DZA65_RS19740 ABC transporter ATP-binding protein no 0.50
    17 DZA65_RS11655 TerC family protein no 0.50
    18 DZA65_RS03630 NAD-dependent epimerase/dehydratase family protein no 0.50
    19 DZA65_RS12945 phage shock protein PspA no 0.50
    20 DZA65_RS06920 cell division protein CpoB no 0.50

    Or look for negative cofitness