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  • Top cofit genes for DZA65_RS05030 from Dickeya dianthicola ME23

    TIGR03749 family integrating conjugative element protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS10485 membrane protein no 0.51
    2 DZA65_RS16610 IMP dehydrogenase no 0.51
    3 DZA65_RS06120 efflux RND transporter periplasmic adaptor subunit no 0.51
    4 DZA65_RS04230 outer membrane protein assembly factor BamE no 0.50
    5 DZA65_RS19750 hypothetical protein no 0.50
    6 DZA65_RS06115 multidrug efflux RND transporter permease subunit no 0.49
    7 DZA65_RS08175 formate dehydrogenase subunit beta no 0.48
    8 DZA65_RS19730 GDP-mannose 4,6-dehydratase no 0.48
    9 DZA65_RS00360 MarR family transcriptional regulator no 0.48
    10 DZA65_RS11120 mannose-6-phosphate isomerase no 0.48
    11 DZA65_RS16275 Flp pilus assembly complex ATPase component TadA no 0.47
    12 DZA65_RS19755 glycosyltransferase no 0.47
    13 DZA65_RS06030 peptidylprolyl isomerase no 0.46
    14 DZA65_RS03635 sugar transferase no 0.46
    15 DZA65_RS05310 thymidylate synthase no 0.46
    16 DZA65_RS22555 phosphate ABC transporter ATP-binding protein PstB no 0.45
    17 DZA65_RS07110 dTDP-glucose 4,6-dehydratase no 0.45
    18 DZA65_RS19720 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase no 0.45
    19 DZA65_RS19725 phosphomannomutase/phosphoglucomutase no 0.45
    20 DZA65_RS06895 Tol-Pal system protein TolQ no 0.45

    Or look for negative cofitness