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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS05005 from
Dickeya dianthicola ME23
integrative conjugative element protein, RAQPRD family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS11865
tRNA 2-thiouridine(34) synthase MnmA
no
0.54
2
DZA65
_RS09910
thioredoxin-disulfide reductase
no
0.50
3
DZA65
_RS10485
membrane protein
no
0.48
4
DZA65
_RS00795
glycosyltransferase family 9 protein
no
0.48
5
DZA65
_RS22360
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
no
0.46
6
DZA65
_RS10905
TonB system transport protein TonB
no
0.46
7
DZA65
_RS10810
formyltetrahydrofolate deformylase
no
0.45
8
DZA65
_RS07125
dTDP-4-dehydrorhamnose reductase
no
0.45
9
DZA65
_RS21275
guanosine-5'-triphosphate,3'-diphosphate diphosphatase
no
0.45
10
DZA65
_RS06445
M48 family metallopeptidase
no
0.45
11
DZA65
_RS13370
ABC transporter ATP-binding protein
0.41
0.45
12
DZA65
_RS00465
hypothetical protein
no
0.44
13
DZA65
_RS06365
ABC transporter permease
no
0.44
14
DZA65
_RS05030
TIGR03749 family integrating conjugative element protein
no
0.44
15
DZA65
_RS05850
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
no
0.44
16
DZA65
_RS10285
LysR family transcriptional regulator
no
0.43
17
DZA65
_RS06465
outer membrane protein assembly factor BamC
0.32
0.43
18
DZA65
_RS04230
outer membrane protein assembly factor BamE
0.30
0.43
19
DZA65
_RS03630
NAD-dependent epimerase/dehydratase family protein
no
0.41
20
DZA65
_RS17575
ABC transporter permease
no
0.41
Or look for
negative cofitness