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  • Top cofit genes for DZA65_RS04900 from Dickeya dianthicola ME23

    hypothetical protein
    SEED: IncI1 plasmid conjugative transfer protein PilL

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS22120 tetratricopeptide repeat protein no 0.47
    2 DZA65_RS09170 phosphatase PAP2 family protein no 0.45
    3 DZA65_RS18275 HAMP domain-containing protein no 0.45
    4 DZA65_RS17275 transposase no 0.40
    5 DZA65_RS03805 GNAT family N-acetyltransferase no 0.40
    6 DZA65_RS01800 L-rhamnose mutarotase no 0.39
    7 DZA65_RS12155 lytic murein transglycosylase no 0.39
    8 DZA65_RS04930 pilus assembly protein PilR no 0.39
    9 DZA65_RS02635 MHS family MFS transporter no 0.39
    10 DZA65_RS10640 ATP-binding protein no 0.39
    11 DZA65_RS17535 GTPase 0.39 0.38
    12 DZA65_RS04600 conjugal transfer protein TraF no 0.38
    13 DZA65_RS09105 peptidase T no 0.37
    14 DZA65_RS20035 hypothetical protein no 0.37
    15 DZA65_RS11560 hypothetical protein no 0.37
    16 DZA65_RS06615 glutamate/aspartate ABC transporter substrate-binding protein no 0.37
    17 DZA65_RS00120 oxalyl-CoA decarboxylase no 0.37
    18 DZA65_RS20665 helix-turn-helix domain-containing protein no 0.37
    19 DZA65_RS22055 ROK family transcriptional regulator no 0.36
    20 DZA65_RS15475 endonuclease SmrB no 0.36

    Or look for negative cofitness