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  • Top cofit genes for DZA65_RS04885 from Dickeya dianthicola ME23

    RNA-directed DNA polymerase
    SEED: Retron-type RNA-directed DNA polymerase (EC 2.7.7.49)

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS08755 DUF1869 domain-containing protein no 0.51
    2 DZA65_RS09680 methyl-accepting chemotaxis protein no 0.46
    3 DZA65_RS11465 LacI family transcriptional regulator no 0.46
    4 DZA65_RS00280 HAMP domain-containing protein no 0.44
    5 DZA65_RS06245 2Fe-2S ferredoxin-like protein no 0.43
    6 DZA65_RS02790 DUF4868 domain-containing protein no 0.41
    7 DZA65_RS20215 DUF4156 domain-containing protein no 0.40
    8 DZA65_RS12595 baseplate assembly protein no 0.37
    9 DZA65_RS21785 lysoplasmalogenase no 0.37
    10 DZA65_RS08425 malonate decarboxylase acyl carrier protein no 0.36
    11 DZA65_RS22625 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase no 0.35
    12 DZA65_RS18530 glycoside hydrolase family 1 protein no 0.35
    13 DZA65_RS01765 2,5-didehydrogluconate reductase DkgA no 0.35
    14 DZA65_RS20965 gluconokinase no 0.35
    15 DZA65_RS07225 proline iminopeptidase-family hydrolase no 0.35
    16 DZA65_RS08725 HlyD family efflux transporter periplasmic adaptor subunit no 0.34
    17 DZA65_RS15530 5'-nucleotidase, lipoprotein e(P4) family no 0.34
    18 DZA65_RS15205 hypothetical protein no 0.34
    19 DZA65_RS00730 ribonuclease PH no 0.34
    20 DZA65_RS16125 YccF domain-containing protein no 0.34

    Or look for negative cofitness