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  • Top cofit genes for DZA65_RS04865 from Dickeya dianthicola ME23

    DNA topoisomerase III
    SEED: DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster
    KEGG: DNA topoisomerase III

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS21665 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB no 0.46
    2 DZA65_RS22775 hypothetical protein no 0.46
    3 DZA65_RS00255 ABC transporter substrate-binding protein 0.37 0.45
    4 DZA65_RS03165 DMT family transporter no 0.44
    5 DZA65_RS03140 putative DNA-binding transcriptional regulator no 0.43
    6 DZA65_RS17325 polyphenol oxidase no 0.42
    7 DZA65_RS02805 helix-turn-helix transcriptional regulator no 0.42
    8 DZA65_RS00575 YicC family protein no 0.42
    9 DZA65_RS06195 hypothetical protein no 0.41
    10 DZA65_RS12515 GAF domain-containing protein no 0.41
    11 DZA65_RS18260 undecaprenyl-diphosphate phosphatase no 0.41
    12 DZA65_RS07410 hypothetical protein no 0.41
    13 DZA65_RS11450 carbohydrate kinase no 0.41
    14 DZA65_RS03145 putative DNA-binding transcriptional regulator no 0.41
    15 DZA65_RS14535 LysR family transcriptional regulator no 0.40
    16 DZA65_RS09740 alpha/beta hydrolase 0.19 0.40
    17 DZA65_RS12495 acyltransferase no 0.39
    18 DZA65_RS07885 glutathione-dependent disulfide-bond oxidoreductase no 0.39
    19 DZA65_RS00580 LysR family transcriptional regulator 0.54 0.39
    20 DZA65_RS01825 iron-containing alcohol dehydrogenase no 0.39

    Or look for negative cofitness