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  • Top cofit genes for DZA65_RS04860 from Dickeya dianthicola ME23

    TIGR03761 family integrating conjugative element protein
    SEED: FIG141694: hypothetical protein in PFGI-1-like cluster

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS05015 TIGR03745 family integrating conjugative element membrane protein no 0.46
    2 DZA65_RS15545 enterobactin transporter EntS no 0.45
    3 DZA65_RS15160 DUF2644 domain-containing protein no 0.45
    4 DZA65_RS10485 membrane protein no 0.45
    5 DZA65_RS22190 glucose-1-phosphatase no 0.43
    6 DZA65_RS06320 membrane protein no 0.42
    7 DZA65_RS08510 efflux RND transporter permease subunit no 0.41
    8 DZA65_RS16655 cytoskeleton protein RodZ no 0.40
    9 DZA65_RS05310 thymidylate synthase no 0.40
    10 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase no 0.40
    11 DZA65_RS05885 transcriptional regulator NrdR no 0.40
    12 DZA65_RS08790 alpha/beta hydrolase no 0.40
    13 DZA65_RS10110 citrate (pro-3S)-lyase subunit beta 0.38 0.39
    14 DZA65_RS17720 xanthine phosphoribosyltransferase no 0.39
    15 DZA65_RS18985 hydrolase no 0.38
    16 DZA65_RS06380 amino acid ABC transporter permease no 0.38
    17 DZA65_RS12595 baseplate assembly protein 0.52 0.38
    18 DZA65_RS07420 arsenic transporter 0.22 0.37
    19 DZA65_RS05415 SecY-interacting protein 0.19 0.37
    20 DZA65_RS04000 tyrosine-type recombinase/integrase no 0.37

    Or look for negative cofitness