Top cofit genes for DZA65_RS04855 from Dickeya dianthicola ME23

helix-turn-helix domain-containing protein
SEED: FIG141751: hypothetical protein in PFGI-1-like cluster

Rank	Hit	Name	Description	Conserved?	Cofitness
1	DZA65_RS14425		TrbI/VirB10 family protein	no	0.49
2	DZA65_RS14400		type IV secretion system protein	no	0.44
3	DZA65_RS12430		methionine synthase	no	0.43
4	DZA65_RS10635		HDOD domain-containing protein	no	0.43
5	DZA65_RS14265		enoyl-CoA hydratase	no	0.43
6	DZA65_RS02765		ATPase AAA	no	0.43
7	DZA65_RS05930		tRNA 4-thiouridine(8) synthase ThiI	no	0.43
8	DZA65_RS09815		23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	no	0.43
9	DZA65_RS11530		hemagglutinin	no	0.42
10	DZA65_RS05180		hypothetical protein	no	0.42
11	DZA65_RS13125		Grx4 family monothiol glutaredoxin	no	0.42
12	DZA65_RS07410		hypothetical protein	no	0.42
13	DZA65_RS22070		arsenic resistance protein	no	0.41
14	DZA65_RS08550		type VI secretion system baseplate subunit TssE	no	0.41
15	DZA65_RS00330		DNA-binding transcriptional regulator	0.28	0.41
16	DZA65_RS00320		xylose ABC transporter ATP-binding protein	no	0.41
17	DZA65_RS04490		ribonuclease Z	no	0.41
18	DZA65_RS11660		PTS mannose transporter subunit IIAB	no	0.41
19	DZA65_RS13315		hypothetical protein	no	0.40
20	DZA65_RS05375		tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	no	0.40

Or look for negative cofitness