• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for DZA65_RS04740 from Dickeya dianthicola ME23

    HsdR family type I site-specific deoxyribonuclease
    SEED: Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
    KEGG: type I restriction enzyme, R subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS00470 acyl-CoA dehydrogenase no 0.51
    2 DZA65_RS20190 fumarate reductase subunit FrdC no 0.46
    3 DZA65_RS05670 L-tyrosine/L-tryptophan isonitrile synthase family protein no 0.43
    4 DZA65_RS03545 hypothetical protein no 0.42
    5 DZA65_RS09460 YejL family protein no 0.42
    6 DZA65_RS01235 deoxyribonuclease V no 0.42
    7 DZA65_RS18385 methyl-accepting chemotaxis protein no 0.41
    8 DZA65_RS13590 phosphotransferase no 0.41
    9 DZA65_RS20000 HipA domain-containing protein no 0.40
    10 DZA65_RS15850 histidine utilization repressor no 0.39
    11 DZA65_RS20135 proline/glycine betaine ABC transporter permease no 0.39
    12 DZA65_RS21975 DUF1471 domain-containing protein no 0.39
    13 DZA65_RS14440 kikA from plasmid origin no 0.39
    14 DZA65_RS21660 sn-glycerol-3-phosphate ABC transporter permease UgpA no 0.39
    15 DZA65_RS10265 NUDIX domain-containing protein no 0.38
    16 DZA65_RS00730 ribonuclease PH no 0.38
    17 DZA65_RS11150 ATP-dependent dethiobiotin synthetase BioD no 0.38
    18 DZA65_RS07605 P-type conjugative transfer protein VirB9 no 0.37
    19 DZA65_RS06725 methyl-accepting chemotaxis protein no 0.37
    20 DZA65_RS04000 tyrosine-type recombinase/integrase no 0.37

    Or look for negative cofitness