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  • Top cofit genes for DZA65_RS04570 from Dickeya dianthicola ME23

    NAD-dependent epimerase/dehydratase family protein
    SEED: Nucleoside-diphosphate-sugar epimerases

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS17850 allantoinase PuuE 0.52 0.53
    2 DZA65_RS21695 hypothetical protein no 0.52
    3 DZA65_RS00045 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ no 0.50
    4 DZA65_RS05145 hypothetical protein no 0.49
    5 DZA65_RS12830 HAMP domain-containing protein no 0.49
    6 DZA65_RS09605 3-oxoacyl-ACP synthase no 0.48
    7 DZA65_RS22460 DNA gyrase subunit B no 0.46
    8 DZA65_RS09860 NADH oxidoreductase no 0.46
    9 DZA65_RS17610 NAD(P)H-dependent oxidoreductase 0.44 0.45
    10 DZA65_RS08220 hypothetical protein 0.55 0.45
    11 DZA65_RS21625 DUF3142 domain-containing protein no 0.44
    12 DZA65_RS19995 hypothetical protein no 0.44
    13 DZA65_RS00770 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase no 0.44
    14 DZA65_RS04870 DUF3577 domain-containing protein no 0.43
    15 DZA65_RS21730 high-affinity branched-chain amino acid ABC transporter permease LivM no 0.42
    16 DZA65_RS06430 uracil permease no 0.42
    17 DZA65_RS10780 NAD(P)H nitroreductase 0.28 0.41
    18 DZA65_RS06085 MGMT family protein no 0.41
    19 DZA65_RS16320 DUF4337 domain-containing protein no 0.41
    20 DZA65_RS09050 endonuclease/exonuclease/phosphatase family protein 0.33 0.41

    Or look for negative cofitness