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  • Top cofit genes for DZA65_RS04550 from Dickeya dianthicola ME23

    rhamnogalacturonate lyase
    SEED: rhamnogalacturonate lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS19250 thiamine ABC transporter substrate binding subunit no 0.49
    2 DZA65_RS21870 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB no 0.46
    3 DZA65_RS11380 DUF1471 domain-containing protein no 0.45
    4 DZA65_RS02460 YecA family protein 0.41 0.44
    5 DZA65_RS03300 GIY-YIG nuclease family protein no 0.43
    6 DZA65_RS02580 acetyltransferase no 0.43
    7 DZA65_RS00740 nucleoid occlusion factor SlmA no 0.42
    8 DZA65_RS08435 biotin-independent malonate decarboxylase subunit gamma no 0.42
    9 DZA65_RS19865 amino acid ABC transporter permease no 0.41
    10 DZA65_RS09145 aspartate aminotransferase family protein no 0.41
    11 DZA65_RS20755 SPOR domain-containing protein no 0.40
    12 DZA65_RS09040 Bax inhibitor-1/YccA family protein no 0.40
    13 DZA65_RS06990 UDP-glucose 4-epimerase GalE no 0.40
    14 DZA65_RS06860 succinate--CoA ligase subunit alpha no 0.39
    15 DZA65_RS13570 glycine zipper 2TM domain-containing protein no 0.39
    16 DZA65_RS00830 divergent polysaccharide deacetylase family protein no 0.39
    17 DZA65_RS08515 efflux RND transporter periplasmic adaptor subunit 0.66 0.39
    18 DZA65_RS13015 L-ribulose-5-phosphate 4-epimerase no 0.38
    19 DZA65_RS19055 GMP reductase no 0.38
    20 DZA65_RS11735 carbohydrate ABC transporter permease no 0.37

    Or look for negative cofitness