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  • Top cofit genes for DZA65_RS04535 from Dickeya dianthicola ME23

    NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
    SEED: NADPH dependent preQ0 reductase (EC 1.7.1.13)
    KEGG: 7-cyano-7-deazaguanine reductase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04545 helix-turn-helix transcriptional regulator 0.90 0.95
    2 DZA65_RS04300 LuxR family transcriptional regulator no 0.84
    3 DZA65_RS09740 alpha/beta hydrolase no 0.80
    4 DZA65_RS13830 flagella biosynthesis regulatory protein FliZ no 0.79
    5 DZA65_RS04305 cytosine permease no 0.78
    6 DZA65_RS12515 GAF domain-containing protein 0.54 0.76
    7 DZA65_RS03145 putative DNA-binding transcriptional regulator no 0.74
    8 DZA65_RS13545 arylamine N-acetyltransferase 0.67 0.72
    9 DZA65_RS09855 DUF2867 domain-containing protein 0.73 0.71
    10 DZA65_RS00575 YicC family protein 0.25 0.70
    11 DZA65_RS22775 hypothetical protein no 0.70
    12 DZA65_RS13440 porin no 0.70
    13 DZA65_RS00580 LysR family transcriptional regulator 0.56 0.67
    14 DZA65_RS18615 LysR family transcriptional regulator no 0.66
    15 DZA65_RS18260 undecaprenyl-diphosphate phosphatase 0.65 0.66
    16 DZA65_RS02805 helix-turn-helix transcriptional regulator 0.64 0.65
    17 DZA65_RS21665 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 0.32 0.65
    18 DZA65_RS10840 thymidine kinase 0.76 0.62
    19 DZA65_RS21795 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter no 0.62
    20 DZA65_RS04780 hypothetical protein no 0.62

    Or look for negative cofitness