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  • Top cofit genes for DZA65_RS04530 from Dickeya dianthicola ME23

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS21475 met regulon transcriptional regulator MetJ no 0.48
    2 DZA65_RS18240 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase 0.38 0.48
    3 DZA65_RS01010 FAD-dependent oxidoreductase no 0.46
    4 DZA65_RS06705 PTS transporter subunit EIIC no 0.45
    5 DZA65_RS22320 YgiW/YdeI family stress tolerance OB fold protein 0.44 0.45
    6 DZA65_RS12300 amino acid ABC transporter permease no 0.45
    7 DZA65_RS10055 histidinol dehydrogenase 0.44 0.45
    8 DZA65_RS06760 two-component system sensor histidine kinase KdbD 0.50 0.45
    9 DZA65_RS19480 homoserine kinase no 0.43
    10 DZA65_RS17165 aspartate 1-decarboxylase 0.37 0.42
    11 DZA65_RS09615 acyl carrier protein no 0.42
    12 DZA65_RS00895 phosphoenolpyruvate carboxylase 0.42 0.41
    13 DZA65_RS05940 2-dehydropantoate 2-reductase 0.41 0.40
    14 DZA65_RS19485 bifunctional aspartate kinase/homoserine dehydrogenase I no 0.40
    15 DZA65_RS10060 ATP phosphoribosyltransferase no 0.40
    16 DZA65_RS17160 pantoate--beta-alanine ligase 0.43 0.40
    17 DZA65_RS21470 cystathionine gamma-synthase 0.23 0.40
    18 DZA65_RS17155 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.32 0.39
    19 DZA65_RS01630 FAD-dependent oxidoreductase 0.43 0.39
    20 DZA65_RS12370 MFS transporter no 0.39

    Or look for negative cofitness