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  • Top cofit genes for DZA65_RS04480 from Dickeya dianthicola ME23

    LysR family transcriptional regulator
    SEED: LysR-family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04040 hypothetical protein no 0.51
    2 DZA65_RS07185 hypothetical protein no 0.49
    3 DZA65_RS17510 phosphatidylserine decarboxylase family protein no 0.49
    4 DZA65_RS10400 type VI secretion system tip protein VgrG no 0.49
    5 DZA65_RS15185 hypothetical protein no 0.48
    6 DZA65_RS09390 hypothetical protein 0.38 0.47
    7 DZA65_RS18525 PTS sugar transporter subunit IIB no 0.46
    8 DZA65_RS19245 HTH-type transcriptional regulator SgrR no 0.46
    9 DZA65_RS17260 class I SAM-dependent methyltransferase no 0.45
    10 DZA65_RS02730 hypothetical protein 0.53 0.45
    11 DZA65_RS00250 ABC transporter permease subunit no 0.45
    12 DZA65_RS09175 DUF1349 domain-containing protein no 0.45
    13 DZA65_RS06805 5-oxoprolinase subunit PxpB no 0.45
    14 DZA65_RS12170 type III secretion inner membrane ring lipoprotein SctJ no 0.44
    15 DZA65_RS08210 cyclic beta 1-2 glucan synthetase no 0.43
    16 DZA65_RS17875 glycine betaine/L-proline ABC transporter ATP-binding protein ProV no 0.42
    17 DZA65_RS16585 hypothetical protein no 0.42
    18 DZA65_RS12825 DUF333 domain-containing protein no 0.41
    19 DZA65_RS11340 hypothetical protein no 0.41
    20 DZA65_RS15235 AAA family ATPase no 0.41

    Or look for negative cofitness