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  • Top cofit genes for DZA65_RS04465 from Dickeya dianthicola ME23

    4Fe-4S dicluster domain-containing protein
    SEED: NrfC protein
    KEGG: formate-dependent nitrite reductase, Fe-S protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS05815 phosphate regulon sensor histidine kinase PhoR 0.58 0.54
    2 DZA65_RS11245 type I secretion system permease/ATPase no 0.52
    3 DZA65_RS12940 envelope stress response membrane protein PspB no 0.48
    4 DZA65_RS08440 AEC family transporter no 0.48
    5 DZA65_RS11630 YoaH family protein no 0.48
    6 DZA65_RS18880 carbohydrate ABC transporter substrate-binding protein no 0.46
    7 DZA65_RS20780 hypothetical protein no 0.45
    8 DZA65_RS15035 hypothetical protein no 0.45
    9 DZA65_RS07250 ABC transporter ATP-binding protein no 0.45
    10 DZA65_RS00680 M55 family metallopeptidase no 0.45
    11 DZA65_RS06640 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.29 0.44
    12 DZA65_RS08285 ABC transporter substrate-binding protein no 0.44
    13 DZA65_RS07565 CcdB family protein no 0.44
    14 DZA65_RS06130 mechanosensitive channel MscK no 0.44
    15 DZA65_RS07995 phosphonate metabolism protein PhnP no 0.44
    16 DZA65_RS22975 hypothetical protein no 0.43
    17 DZA65_RS04220 type II toxin-antitoxin system RatA family toxin no 0.43
    18 DZA65_RS17845 oxalurate catabolism protein HpxZ no 0.43
    19 DZA65_RS03755 helix-turn-helix transcriptional regulator no 0.42
    20 DZA65_RS17790 amidohydrolase 0.44 0.42

    Or look for negative cofitness