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  • Top cofit genes for DZA65_RS04095 from Dickeya dianthicola ME23

    terminase
    SEED: Phage terminase, endonuclease subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS06125 multidrug efflux transporter transcriptional repressor AcrR no 0.43
    2 DZA65_RS04295 transcriptional regulator no 0.43
    3 DZA65_RS15505 long-chain fatty acid transporter FadL no 0.42
    4 DZA65_RS13790 Lon protease family protein no 0.42
    5 DZA65_RS17700 sigma factor-binding protein Crl no 0.41
    6 DZA65_RS14800 alpha/beta hydrolase no 0.41
    7 DZA65_RS17220 adenosylmethionine decarboxylase no 0.41
    8 DZA65_RS03490 bifunctional protein-disulfide isomerase/oxidoreductase DsbC no 0.40
    9 DZA65_RS14865 hydrogenase maturation factor HybG no 0.40
    10 DZA65_RS18880 carbohydrate ABC transporter substrate-binding protein no 0.40
    11 DZA65_RS19940 IS630 family transposase no 0.39
    12 DZA65_RS02835 protein-disulfide reductase DsbD no 0.39
    13 DZA65_RS17505 sugar ABC transporter permease YjfF 0.48 0.38
    14 DZA65_RS01990 ribonuclease E inhibitor RraB no 0.37
    15 DZA65_RS02660 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC no 0.36
    16 DZA65_RS09255 biotin-dependent carboxyltransferase no 0.36
    17 DZA65_RS02810 transcriptional regulator no 0.36
    18 DZA65_RS11325 LysR family transcriptional regulator no 0.36
    19 DZA65_RS20770 DNA uptake porin HofQ no 0.36
    20 DZA65_RS13700 ribonuclease E no 0.36

    Or look for negative cofitness