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  • Top cofit genes for DZA65_RS04005 from Dickeya dianthicola ME23

    site-specific integrase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS14310 LysR family transcriptional regulator no 0.49
    2 DZA65_RS21345 acetolactate synthase 2 small subunit no 0.44
    3 DZA65_RS07865 hydrogenase maturation factor HybG no 0.43
    4 DZA65_RS14440 kikA from plasmid origin no 0.43
    5 DZA65_RS10090 2-hydroxycarboxylate transporter family protein no 0.43
    6 DZA65_RS04890 hypothetical protein no 0.43
    7 DZA65_RS00645 hypothetical protein no 0.41
    8 DZA65_RS07520 aspartyl/asparaginyl beta-hydroxylase domain-containing protein no 0.41
    9 DZA65_RS05715 hypothetical protein no 0.41
    10 DZA65_RS21895 HipA domain-containing protein no 0.39
    11 DZA65_RS01510 RNA polymerase factor sigma-54 no 0.39
    12 DZA65_RS11325 LysR family transcriptional regulator 0.76 0.38
    13 DZA65_RS10085 sensor histidine kinase no 0.38
    14 DZA65_RS05620 GNAT family N-acetyltransferase no 0.37
    15 DZA65_RS07805 addiction module antitoxin no 0.37
    16 DZA65_RS22790 hypothetical protein no 0.36
    17 DZA65_RS22550 phosphate ABC transporter permease PstA 0.64 0.36
    18 DZA65_RS03430 acetolactate synthase AlsS no 0.36
    19 DZA65_RS15845 YkgJ family cysteine cluster protein no 0.36
    20 DZA65_RS17675 hypothetical protein no 0.36

    Or look for negative cofitness