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  • Top cofit genes for DZA65_RS03585 from Dickeya dianthicola ME23

    helix-turn-helix transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS07360 glutathione S-transferase family protein no 0.48
    2 DZA65_RS17740 murein L,D-transpeptidase no 0.48
    3 DZA65_RS07320 DUF4868 domain-containing protein no 0.46
    4 DZA65_RS11140 LysR family transcriptional regulator no 0.45
    5 DZA65_RS16285 type II secretion system major pseudopilin GspG no 0.45
    6 DZA65_RS18145 GTP diphosphokinase no 0.44
    7 DZA65_RS04255 divalent metal cation transporter 0.47 0.44
    8 DZA65_RS14385 ATPase no 0.43
    9 DZA65_RS17265 hydroxyacylglutathione hydrolase 0.51 0.43
    10 DZA65_RS13265 transcriptional antiterminator BglG no 0.43
    11 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB no 0.43
    12 DZA65_RS14430 P-type DNA transfer ATPase VirB11 0.44 0.43
    13 DZA65_RS10890 cardiolipin synthase no 0.42
    14 DZA65_RS19915 nitrogenase cofactor biosynthesis protein NifB no 0.42
    15 DZA65_RS19465 transaldolase no 0.42
    16 DZA65_RS01715 ADP-ribose diphosphatase 0.67 0.41
    17 DZA65_RS14320 integrase arm-type DNA-binding domain-containing protein no 0.41
    18 DZA65_RS08625 GGDEF domain-containing protein no 0.41
    19 DZA65_RS02290 SDR family oxidoreductase no 0.40
    20 DZA65_RS09515 hypothetical protein no 0.39

    Or look for negative cofitness