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  • Top cofit genes for DZA65_RS03535 from Dickeya dianthicola ME23

    RNA polymerase subunit sigma-24

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS03365 SAM-dependent DNA methyltransferase no 0.49
    2 DZA65_RS00885 uridine phosphorylase no 0.43
    3 DZA65_RS07615 type IV secretion system protein no 0.37
    4 DZA65_RS13020 osmotically-inducible lipoprotein OsmB no 0.37
    5 DZA65_RS01505 ribosome hibernation promoting factor no 0.36
    6 DZA65_RS01345 hypothetical protein no 0.36
    7 DZA65_RS11185 acyltransferase family protein no 0.35
    8 DZA65_RS01925 proteasome-type protease no 0.33
    9 DZA65_RS20265 isocitrate lyase no 0.33
    10 DZA65_RS11500 hypothetical protein no 0.33
    11 DZA65_RS09835 arginine ABC transporter permease ArtQ no 0.33
    12 DZA65_RS19165 division/cell wall cluster transcriptional repressor MraZ no 0.33
    13 DZA65_RS03410 tRNA-Leu no 0.33
    14 DZA65_RS15975 DoxX family protein no 0.33
    15 DZA65_RS18560 Fic family protein no 0.32
    16 DZA65_RS12440 L-threonine dehydrogenase no 0.32
    17 DZA65_RS14540 SnoaL-like domain-containing protein no 0.32
    18 DZA65_RS02395 HTH-type transcriptional activator RhaS no 0.32
    19 DZA65_RS04520 stress response protein AzuC no 0.32
    20 DZA65_RS11595 cell division topological specificity factor MinE no 0.32

    Or look for negative cofitness