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  • Top cofit genes for DZA65_RS03440 from Dickeya dianthicola ME23

    glycine cleavage system protein GcvH
    SEED: Glycine cleavage system H protein
    KEGG: glycine cleavage system H protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS17665 hypothetical protein no 0.56
    2 DZA65_RS14325 helix-turn-helix transcriptional regulator no 0.47
    3 DZA65_RS15920 SDR family NAD(P)-dependent oxidoreductase no 0.44
    4 DZA65_RS03300 GIY-YIG nuclease family protein no 0.43
    5 DZA65_RS09040 Bax inhibitor-1/YccA family protein 0.67 0.42
    6 DZA65_RS22960 hypothetical protein no 0.42
    7 DZA65_RS05990 muropeptide MFS transporter AmpG no 0.41
    8 DZA65_RS18425 cytosine deaminase 0.27 0.41
    9 DZA65_RS04170 hypothetical protein no 0.41
    10 DZA65_RS07045 hypothetical protein no 0.40
    11 DZA65_RS11080 L-arabinose ABC transporter ATP-binding protein AraG no 0.40
    12 DZA65_RS11345 superoxide dismutase 0.56 0.39
    13 DZA65_RS17800 alanine--glyoxylate aminotransferase family protein 0.23 0.39
    14 DZA65_RS12710 serine/threonine protein phosphatase no 0.39
    15 DZA65_RS18200 hypothetical protein no 0.38
    16 DZA65_RS09570 1-phosphofructokinase no 0.38
    17 DZA65_RS08435 biotin-independent malonate decarboxylase subunit gamma no 0.38
    18 DZA65_RS04165 hypothetical protein no 0.38
    19 DZA65_RS08815 type II toxin-antitoxin system CcdA family antitoxin no 0.37
    20 DZA65_RS00105 formyl-CoA transferase 0.63 0.37

    Or look for negative cofitness