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  • Top cofit genes for DZA65_RS03435 from Dickeya dianthicola ME23

    glycine cleavage system aminomethyltransferase GcvT
    SEED: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
    KEGG: aminomethyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS22090 sugar ABC transporter permease no 0.42
    2 DZA65_RS21830 hypothetical protein no 0.41
    3 DZA65_RS03000 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.41 0.40
    4 DZA65_RS12695 diguanylate cyclase no 0.40
    5 DZA65_RS04155 phage tail tape measure protein no 0.39
    6 DZA65_RS17795 allantoate amidohydrolase no 0.39
    7 DZA65_RS19960 homocitrate synthase no 0.38
    8 DZA65_RS02185 DUF1778 domain-containing protein no 0.38
    9 DZA65_RS05750 HAD family hydrolase no 0.36
    10 DZA65_RS13405 FMNH2-dependent alkanesulfonate monooxygenase 0.34 0.36
    11 DZA65_RS00710 L-Ala-D/L-Glu epimerase no 0.35
    12 DZA65_RS17630 AMP-binding protein no 0.35
    13 DZA65_RS16105 CoA-binding protein 0.67 0.35
    14 DZA65_RS16360 hypothetical protein no 0.34
    15 DZA65_RS22410 F0F1 ATP synthase subunit epsilon 0.49 0.34
    16 DZA65_RS13380 MOSC domain-containing protein no 0.34
    17 DZA65_RS07530 IS4/IS5 family transposase no 0.34
    18 DZA65_RS10895 HAMP domain-containing protein no 0.34
    19 DZA65_RS00185 valine--pyruvate transaminase no 0.33
    20 DZA65_RS02560 iron ABC transporter permease 0.69 0.33

    Or look for negative cofitness