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  • Top cofit genes for DZA65_RS03345 from Dickeya dianthicola ME23

    cysteine synthase family protein
    SEED: Cysteine synthase B (EC 2.5.1.47)
    KEGG: cysteine synthase A

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS15920 SDR family NAD(P)-dependent oxidoreductase no 0.49
    2 DZA65_RS00455 acyl-CoA/acyl-ACP dehydrogenase no 0.46
    3 DZA65_RS15505 long-chain fatty acid transporter FadL no 0.44
    4 DZA65_RS20575 two-component system sensor histidine kinase PmrB no 0.44
    5 DZA65_RS02420 ABC transporter permease no 0.42
    6 DZA65_RS12210 type III secretion system export apparatus subunit SctV no 0.41
    7 DZA65_RS04735 M48 family metallopeptidase no 0.40
    8 DZA65_RS09490 DEAD/DEAH box helicase no 0.40
    9 DZA65_RS00770 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase no 0.40
    10 DZA65_RS20115 choline ABC transporter substrate-binding protein no 0.40
    11 DZA65_RS04205 zinc ribbon domain-containing protein no 0.39
    12 DZA65_RS18885 glucosamine kinase no 0.39
    13 DZA65_RS09710 30S ribosomal protein S12 methylthiotransferase RimO no 0.38
    14 DZA65_RS12445 NUDIX domain-containing protein no 0.38
    15 DZA65_RS05000 hypothetical protein no 0.38
    16 DZA65_RS05655 hypothetical protein no 0.37
    17 DZA65_RS15230 hypothetical protein no 0.37
    18 DZA65_RS23005 site-specific tyrosine recombinase XerC no 0.37
    19 DZA65_RS22935 hypothetical protein no 0.37
    20 DZA65_RS04650 transposase no 0.37

    Or look for negative cofitness