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  • Top cofit genes for DZA65_RS03310 from Dickeya dianthicola ME23

    thymidine phosphorylase
    SEED: Thymidine phosphorylase (EC 2.4.2.4)
    KEGG: thymidine phosphorylase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS06325 nicotinamide mononucleotide deamidase-related protein YfaY 0.41 0.49
    2 DZA65_RS04545 helix-turn-helix transcriptional regulator no 0.45
    3 DZA65_RS09235 5-oxoprolinase subunit PxpA no 0.44
    4 DZA65_RS21855 endoglucanase no 0.43
    5 DZA65_RS10350 Gfo/Idh/MocA family oxidoreductase 0.34 0.42
    6 DZA65_RS22300 ribose ABC transporter substrate-binding protein RbsB 0.54 0.42
    7 DZA65_RS03555 hypothetical protein no 0.41
    8 DZA65_RS00175 ABC transporter permease no 0.41
    9 DZA65_RS19705 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase no 0.41
    10 DZA65_RS21165 adenylosuccinate lyase no 0.41
    11 DZA65_RS11185 acyltransferase family protein no 0.41
    12 DZA65_RS11455 glycoside hydrolase family 32 protein no 0.41
    13 DZA65_RS20810 GMP/IMP nucleotidase 0.33 0.40
    14 DZA65_RS11600 ribonuclease D no 0.40
    15 DZA65_RS22825 hypothetical protein no 0.39
    16 DZA65_RS02045 arginine deiminase no 0.38
    17 DZA65_RS02140 RNA-directed DNA polymerase no 0.38
    18 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF no 0.38
    19 DZA65_RS19695 N-acetylmuramoyl-L-alanine amidase AmiB no 0.38
    20 DZA65_RS10130 flagellar brake protein YcgR 0.71 0.38

    Or look for negative cofitness