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  • Top cofit genes for DZA65_RS03300 from Dickeya dianthicola ME23

    GIY-YIG nuclease family protein
    SEED: FIG137864: putative endonuclease containing a URI domain
    KEGG: putative endonuclease

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS10390 phage tail protein no 0.58
    2 DZA65_RS18915 DeoR/GlpR transcriptional regulator no 0.54
    3 DZA65_RS08205 peptidase C1 no 0.52
    4 DZA65_RS18200 hypothetical protein no 0.50
    5 DZA65_RS11380 DUF1471 domain-containing protein no 0.50
    6 DZA65_RS05860 preprotein translocase subunit YajC no 0.49
    7 DZA65_RS02305 type-2Aa cytolytic delta-endotoxin no 0.49
    8 DZA65_RS09020 molybdopterin synthase catalytic subunit MoaE no 0.48
    9 DZA65_RS08365 CDP-diacylglycerol diphosphatase no 0.47
    10 DZA65_RS01565 lipid asymmetry maintenance protein MlaB 0.43 0.47
    11 DZA65_RS05010 TIGR03758 family integrating conjugative element protein no 0.47
    12 DZA65_RS03245 tRNA pseudouridine(55) synthase TruB no 0.47
    13 DZA65_RS05570 DNA mismatch repair protein MutS 0.50 0.46
    14 DZA65_RS10905 TonB system transport protein TonB no 0.46
    15 DZA65_RS13840 hypothetical protein 0.32 0.46
    16 DZA65_RS05265 autotransporter serine protease no 0.46
    17 DZA65_RS11285 hypothetical protein no 0.45
    18 DZA65_RS09455 DUF3413 domain-containing protein no 0.43
    19 DZA65_RS13880 flagellar export chaperone FliS 0.38 0.43
    20 DZA65_RS04550 rhamnogalacturonate lyase no 0.43

    Or look for negative cofitness