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  • Top cofit genes for DZA65_RS03285 from Dickeya dianthicola ME23

    U32 family peptidase
    SEED: FIG139552: Putative protease
    KEGG: putative protease

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS21870 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB no 0.46
    2 DZA65_RS12170 type III secretion inner membrane ring lipoprotein SctJ 0.64 0.44
    3 DZA65_RS10255 helix-turn-helix transcriptional regulator no 0.44
    4 DZA65_RS10595 prolyl oligopeptidase family serine peptidase no 0.43
    5 DZA65_RS05860 preprotein translocase subunit YajC no 0.43
    6 DZA65_RS00690 ABC transporter permease subunit no 0.42
    7 DZA65_RS04405 NADH:flavorubredoxin reductase NorW 0.41 0.42
    8 DZA65_RS07790 formate dehydrogenase subunit alpha 0.15 0.42
    9 DZA65_RS14745 nitrate reductase no 0.41
    10 DZA65_RS02910 glutathione S-transferase family protein 0.60 0.41
    11 DZA65_RS16530 YlcG family protein no 0.41
    12 DZA65_RS09875 cold shock-like protein CspD no 0.40
    13 DZA65_RS02670 hypothetical protein no 0.40
    14 DZA65_RS03245 tRNA pseudouridine(55) synthase TruB 0.47 0.40
    15 DZA65_RS06045 PLP-dependent cysteine synthase family protein no 0.39
    16 DZA65_RS15605 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase no 0.39
    17 DZA65_RS09130 glutathione S-transferase family protein no 0.39
    18 DZA65_RS02365 chorismate mutase no 0.39
    19 DZA65_RS07650 AIPR family protein no 0.38
    20 DZA65_RS18940 sodium:solute symporter family protein no 0.38

    Or look for negative cofitness