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  • Top cofit genes for DZA65_RS03145 from Dickeya dianthicola ME23

    putative DNA-binding transcriptional regulator
    SEED: FIG01220305: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS02805 helix-turn-helix transcriptional regulator no 0.90
    2 DZA65_RS04300 LuxR family transcriptional regulator no 0.88
    3 DZA65_RS04780 hypothetical protein no 0.86
    4 DZA65_RS04305 cytosine permease no 0.85
    5 DZA65_RS04545 helix-turn-helix transcriptional regulator no 0.80
    6 DZA65_RS13545 arylamine N-acetyltransferase no 0.77
    7 DZA65_RS17900 transcriptional repressor MprA no 0.76
    8 DZA65_RS12515 GAF domain-containing protein no 0.76
    9 DZA65_RS22775 hypothetical protein no 0.75
    10 DZA65_RS13440 porin no 0.74
    11 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF no 0.74
    12 DZA65_RS09740 alpha/beta hydrolase no 0.73
    13 DZA65_RS00575 YicC family protein no 0.72
    14 DZA65_RS00410 helix-turn-helix transcriptional regulator no 0.69
    15 DZA65_RS13830 flagella biosynthesis regulatory protein FliZ no 0.69
    16 DZA65_RS13105 transcriptional regulator SlyA no 0.66
    17 DZA65_RS22300 ribose ABC transporter substrate-binding protein RbsB 0.52 0.64
    18 DZA65_RS11060 rhamnogalacturonate lyase no 0.63
    19 DZA65_RS00430 histidine kinase no 0.62
    20 DZA65_RS21670 serine hydrolase no 0.61

    Or look for negative cofitness