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  • Top cofit genes for DZA65_RS03065 from Dickeya dianthicola ME23

    SDR family oxidoreductase
    SEED: Probable short-chain dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS04130 M15 family metallopeptidase no 0.45
    2 DZA65_RS06310 o-succinylbenzoate synthase no 0.43
    3 DZA65_RS00015 DNA replication/repair protein RecF no 0.43
    4 DZA65_RS22065 hypothetical protein no 0.43
    5 DZA65_RS17905 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA no 0.41
    6 DZA65_RS17910 multidrug efflux MFS transporter permease subunit EmrB no 0.40
    7 DZA65_RS20030 nitrogenase iron protein no 0.40
    8 DZA65_RS06315 o-succinylbenzoate--CoA ligase no 0.40
    9 DZA65_RS00725 DUF202 domain-containing protein no 0.40
    10 DZA65_RS02395 HTH-type transcriptional activator RhaS no 0.40
    11 DZA65_RS22120 tetratricopeptide repeat protein no 0.40
    12 DZA65_RS14750 nitrite reductase small subunit NirD no 0.39
    13 DZA65_RS11725 pectate disaccharide-lyase no 0.39
    14 DZA65_RS06290 isochorismate synthase MenF no 0.38
    15 DZA65_RS07460 SDR family oxidoreductase no 0.38
    16 DZA65_RS13380 MOSC domain-containing protein no 0.37
    17 DZA65_RS18935 dihydrodipicolinate synthase family protein no 0.37
    18 DZA65_RS15580 enterochelin esterase no 0.36
    19 DZA65_RS08620 hypothetical protein no 0.36
    20 DZA65_RS19655 adenylosuccinate synthase no 0.36

    Or look for negative cofitness