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Cofit
Protein
Homologs
Top cofit genes for DZA65_RS03010 from
Dickeya dianthicola ME23
pectate lyase
SEED: Pectin lyase (EC 4.2.2.10)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
DZA65
_RS05130
hypothetical protein
no
0.47
2
DZA65
_RS02010
GNAT family N-acetyltransferase
0.35
0.46
3
DZA65
_RS00530
DUF1471 domain-containing protein
no
0.44
4
DZA65
_RS04070
ogr/Delta-like zinc finger family protein
no
0.44
5
DZA65
_RS02715
capsular polysaccharide biosynthesis protein
no
0.39
6
DZA65
_RS00630
sulfotransferase family 2 domain-containing protein
no
0.39
7
DZA65
_RS21900
ABC transporter ATP-binding protein
no
0.39
8
DZA65
_RS22800
hypothetical protein
no
0.37
9
DZA65
_RS09325
ATP-binding cassette domain-containing protein
no
0.37
10
DZA65
_RS05145
hypothetical protein
no
0.36
11
DZA65
_RS11990
tyrosine-type recombinase/integrase
no
0.36
12
DZA65
_RS15875
transporter substrate-binding domain-containing protein
no
0.36
13
DZA65
_RS12550
hypothetical protein
no
0.36
14
DZA65
_RS14130
holin
0.39
0.35
15
DZA65
_RS20600
ethanolamine permease
no
0.35
16
DZA65
_RS12830
HAMP domain-containing protein
no
0.35
17
DZA65
_RS03810
YnfC family lipoprotein
no
0.34
18
DZA65
_RS20690
hypothetical protein
no
0.33
19
DZA65
_RS04520
stress response protein AzuC
no
0.33
20
DZA65
_RS07445
hypothetical protein
no
0.33
Or look for
negative cofitness