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  • Top cofit genes for DZA65_RS02870 from Dickeya dianthicola ME23

    chorismate lyase
    SEED: Chorismate--pyruvate lyase (EC 4.1.3.40)
    KEGG: chorismate--pyruvate lyase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS11095 oxidoreductase no 0.48
    2 DZA65_RS09975 formate C-acetyltransferase 0.48 0.47
    3 DZA65_RS02515 stress response protein 0.51 0.46
    4 DZA65_RS16825 HAMP domain-containing histidine kinase 0.85 0.46
    5 DZA65_RS11360 fumarate/nitrate reduction transcriptional regulator Fnr 0.59 0.46
    6 DZA65_RS21930 two-component system response regulator DcuR no 0.45
    7 DZA65_RS19740 ABC transporter ATP-binding protein no 0.44
    8 DZA65_RS18915 DeoR/GlpR transcriptional regulator 0.52 0.43
    9 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB 0.36 0.43
    10 DZA65_RS15635 type II secretion system protein M no 0.43
    11 DZA65_RS18770 phage tail sheath family protein no 0.43
    12 DZA65_RS00055 glutathione-disulfide reductase 0.74 0.42
    13 DZA65_RS10585 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase no 0.42
    14 DZA65_RS01530 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.27 0.42
    15 DZA65_RS07110 dTDP-glucose 4,6-dehydratase 0.71 0.41
    16 DZA65_RS21030 lysophospholipase L2 0.43 0.41
    17 DZA65_RS15280 acetate kinase 0.49 0.41
    18 DZA65_RS06700 glucosamine-6-phosphate deaminase no 0.40
    19 DZA65_RS11720 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD no 0.40
    20 DZA65_RS03635 sugar transferase no 0.40

    Or look for negative cofitness