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  • Top cofit genes for DZA65_RS02540 from Dickeya dianthicola ME23

    amidohydrolase
    SEED: N-acetyl-L,L-diaminopimelate deacetylase (EC 3.5.1.47)
    KEGG: hippurate hydrolase

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS17725 hypothetical protein no 0.45
    2 DZA65_RS03420 LysR family transcriptional regulator 0.44 0.43
    3 DZA65_RS20310 DUF1488 domain-containing protein no 0.41
    4 DZA65_RS08100 siderophore biosynthesis protein SbnG no 0.39
    5 DZA65_RS00695 ABC transporter permease subunit no 0.38
    6 DZA65_RS19625 16S rRNA (uracil(1498)-N(3))-methyltransferase 0.14 0.38
    7 DZA65_RS04425 LysR family transcriptional regulator 0.48 0.38
    8 DZA65_RS16375 hypothetical protein no 0.38
    9 DZA65_RS10555 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase no 0.37
    10 DZA65_RS15115 minor capsid protein no 0.37
    11 DZA65_RS08680 CidA/LrgA family protein no 0.37
    12 DZA65_RS05065 TIGR03757 family integrating conjugative element protein no 0.37
    13 DZA65_RS13845 FkbM family methyltransferase no 0.36
    14 DZA65_RS14870 hydrogenase nickel incorporation protein HypB 0.46 0.36
    15 DZA65_RS12110 Harpin hrpN no 0.36
    16 DZA65_RS19175 catabolite repressor/activator no 0.36
    17 DZA65_RS16350 lysozyme no 0.36
    18 DZA65_RS01740 LysR family transcriptional regulator no 0.36
    19 DZA65_RS07215 lactonase family protein no 0.35
    20 DZA65_RS22985 hypothetical protein no 0.35

    Or look for negative cofitness