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  • Top cofit genes for DZA65_RS02400 from Dickeya dianthicola ME23

    HTH-type transcriptional activator RhaR
    SEED: L-rhamnose operon transcriptional activator RhaR
    KEGG: AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS21710 MFS transporter no 0.46
    2 DZA65_RS13040 LapA family protein no 0.43
    3 DZA65_RS05180 hypothetical protein no 0.40
    4 DZA65_RS18620 tRNA dihydrouridine(20/20a) synthase DusA 0.54 0.39
    5 DZA65_RS14715 LysR family transcriptional regulator no 0.38
    6 DZA65_RS17720 xanthine phosphoribosyltransferase 0.44 0.38
    7 DZA65_RS17770 acireductone dioxygenase no 0.38
    8 DZA65_RS03455 hemolysin III family protein no 0.38
    9 DZA65_RS17265 hydroxyacylglutathione hydrolase 0.29 0.38
    10 DZA65_RS19630 glutathione synthase no 0.37
    11 DZA65_RS12555 hypothetical protein no 0.37
    12 DZA65_RS08790 alpha/beta hydrolase no 0.37
    13 DZA65_RS22190 glucose-1-phosphatase 0.37 0.37
    14 DZA65_RS15180 regulatory protein GemA no 0.37
    15 DZA65_RS07420 arsenic transporter 0.21 0.36
    16 DZA65_RS12340 amidohydrolase 0.21 0.36
    17 DZA65_RS21430 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.37 0.35
    18 DZA65_RS14595 cupin no 0.35
    19 DZA65_RS00175 ABC transporter permease no 0.35
    20 DZA65_RS11600 ribonuclease D no 0.35

    Or look for negative cofitness