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  • Top cofit genes for DZA65_RS02320 from Dickeya dianthicola ME23

    ABC transporter permease
    SEED: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 DZA65_RS07790 formate dehydrogenase subunit alpha no 0.53
    2 DZA65_RS12025 EndoU domain-containing protein no 0.52
    3 DZA65_RS10895 HAMP domain-containing protein no 0.49
    4 DZA65_RS12305 amino acid ABC transporter permease no 0.48
    5 DZA65_RS18930 iron-containing alcohol dehydrogenase no 0.48
    6 DZA65_RS09145 aspartate aminotransferase family protein no 0.46
    7 DZA65_RS09380 hypothetical protein no 0.46
    8 DZA65_RS22860 hypothetical protein no 0.45
    9 DZA65_RS02950 MFS transporter no 0.44
    10 DZA65_RS12365 ABC transporter substrate-binding protein no 0.44
    11 DZA65_RS18220 hypothetical protein 0.47 0.43
    12 DZA65_RS20695 gamma-aminobutyric-acid receptor subunit beta no 0.43
    13 DZA65_RS21870 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB no 0.43
    14 DZA65_RS21905 dipeptide ABC transporter ATP-binding protein no 0.43
    15 DZA65_RS12325 4-hydroxy-tetrahydrodipicolinate synthase no 0.43
    16 DZA65_RS03770 HlyD family secretion protein no 0.42
    17 DZA65_RS03870 sugar ABC transporter substrate-binding protein no 0.42
    18 DZA65_RS08190 LacI family DNA-binding transcriptional regulator no 0.41
    19 DZA65_RS14470 hypothetical protein no 0.40
    20 DZA65_RS07440 IS5 family transposase no 0.40

    Or look for negative cofitness